Serveur d'exploration sur les relations entre la France et l'Australie

Attention, ce site est en cours de développement !
Attention, site généré par des moyens informatiques à partir de corpus bruts.
Les informations ne sont donc pas validées.

Eubacterium aggregans sp. nov., a New Homoacetogenic Bacterium from Olive Mill Wastewater Treatment Digestor

Identifieur interne : 00C998 ( Main/Exploration ); précédent : 00C997; suivant : 00C999

Eubacterium aggregans sp. nov., a New Homoacetogenic Bacterium from Olive Mill Wastewater Treatment Digestor

Auteurs : Tahar Mechichi [France] ; Marc Labat [France] ; Tony H. S. Woo [Australie] ; Pierre Thomas [France] ; Jean-Louis Garcia [France] ; Bharat K. C. Patel [Australie]

Source :

RBID : ISTEX:264023BBB45CA521C0560E4C3A9ECB01DEAD1F1D

Descripteurs français

English descriptors

Abstract

Abstract: A strictly anaerobic, homoacetogenic, Gram-positive, non spore-forming bacterium, designated strain SR12T(T=type strain), was isolated from an anaerobic methanogenic digestor fed with olive mill wastewater. Yeast extract was required for growth but could also be used as sole carbon and energy source. Strain SR12Tutilized a few carbohydrates (glucose, fructose and sucrose), organic compounds (lactate, crotonate, formate and betaine), alcohols (methanol), the methoxyl group of some methoxylated aromatic compounds, and H2+CO2. The end-products of carbohydrate fermentation were acetate, formate, butyrate, H2and CO2. End-products from lactate and methoxylated aromatic compounds were acetate and butyrate. Strain SR12Twas non-motile, formed aggregates, had a G+C content of 55 mol % and grew optimally at 35°C and pH 7.2 on a medium containing glucose. Phylogenetically, strain SR12Twas related toEubacterium barkeri, E. callanderi, andE. limosumwithE. barkerias the closest relative (similarity of 98%) with which it bears little phenotypic similarity or DNA homology (60%). On the basis of its phenotypic, genotypic, and phylogenetic characteristics, we propose to designate strain SR12TasEubacterium aggreganssp. nov. The type strain is SR12T(=DSM 12183).

Url:
DOI: 10.1006/anae.1998.0179


Affiliations:


Links toward previous steps (curation, corpus...)


Le document en format XML

<record>
<TEI wicri:istexFullTextTei="biblStruct">
<teiHeader>
<fileDesc>
<titleStmt>
<title xml:lang="en">Eubacterium aggregans sp. nov., a New Homoacetogenic Bacterium from Olive Mill Wastewater Treatment Digestor</title>
<author>
<name sortKey="Mechichi, Tahar" sort="Mechichi, Tahar" uniqKey="Mechichi T" first="Tahar" last="Mechichi">Tahar Mechichi</name>
</author>
<author>
<name sortKey="Labat, Marc" sort="Labat, Marc" uniqKey="Labat M" first="Marc" last="Labat">Marc Labat</name>
</author>
<author>
<name sortKey="Woo, Tony H S" sort="Woo, Tony H S" uniqKey="Woo T" first="Tony H. S." last="Woo">Tony H. S. Woo</name>
</author>
<author>
<name sortKey="Thomas, Pierre" sort="Thomas, Pierre" uniqKey="Thomas P" first="Pierre" last="Thomas">Pierre Thomas</name>
</author>
<author>
<name sortKey="Garcia, Jean Louis" sort="Garcia, Jean Louis" uniqKey="Garcia J" first="Jean-Louis" last="Garcia">Jean-Louis Garcia</name>
</author>
<author>
<name sortKey="Patel, Bharat K C" sort="Patel, Bharat K C" uniqKey="Patel B" first="Bharat K. C." last="Patel">Bharat K. C. Patel</name>
</author>
</titleStmt>
<publicationStmt>
<idno type="wicri:source">ISTEX</idno>
<idno type="RBID">ISTEX:264023BBB45CA521C0560E4C3A9ECB01DEAD1F1D</idno>
<date when="1998" year="1998">1998</date>
<idno type="doi">10.1006/anae.1998.0179</idno>
<idno type="url">https://api.istex.fr/document/264023BBB45CA521C0560E4C3A9ECB01DEAD1F1D/fulltext/pdf</idno>
<idno type="wicri:Area/Istex/Corpus">000749</idno>
<idno type="wicri:explorRef" wicri:stream="Istex" wicri:step="Corpus" wicri:corpus="ISTEX">000749</idno>
<idno type="wicri:Area/Istex/Curation">000749</idno>
<idno type="wicri:Area/Istex/Checkpoint">002357</idno>
<idno type="wicri:explorRef" wicri:stream="Istex" wicri:step="Checkpoint">002357</idno>
<idno type="wicri:doubleKey">1075-9964:1998:Mechichi T:eubacterium:aggregans:sp</idno>
<idno type="wicri:Area/Main/Merge">00DA35</idno>
<idno type="wicri:Area/Main/Curation">00C998</idno>
<idno type="wicri:Area/Main/Exploration">00C998</idno>
</publicationStmt>
<sourceDesc>
<biblStruct>
<analytic>
<title level="a" type="main" xml:lang="en">Eubacterium aggregans sp. nov., a New Homoacetogenic Bacterium from Olive Mill Wastewater Treatment Digestor</title>
<author>
<name sortKey="Mechichi, Tahar" sort="Mechichi, Tahar" uniqKey="Mechichi T" first="Tahar" last="Mechichi">Tahar Mechichi</name>
<affiliation wicri:level="4">
<country xml:lang="fr">France</country>
<wicri:regionArea>Laboratoire ORSTOM de Microbiologie des Anaérobies, Université de Provence, CESB-ESIL case 925, 163 Avenue de Luminy, 13288, Marseille Cedex 9</wicri:regionArea>
<placeName>
<region type="region" nuts="2">Provence-Alpes-Côte d'Azur</region>
<settlement type="city">Marseille</settlement>
<settlement type="city">Marseille</settlement>
</placeName>
<orgName type="university">Université de Provence</orgName>
</affiliation>
</author>
<author>
<name sortKey="Labat, Marc" sort="Labat, Marc" uniqKey="Labat M" first="Marc" last="Labat">Marc Labat</name>
<affiliation wicri:level="4">
<country xml:lang="fr">France</country>
<wicri:regionArea>Laboratoire ORSTOM de Microbiologie des Anaérobies, Université de Provence, CESB-ESIL case 925, 163 Avenue de Luminy, 13288, Marseille Cedex 9</wicri:regionArea>
<placeName>
<region type="region" nuts="2">Provence-Alpes-Côte d'Azur</region>
<settlement type="city">Marseille</settlement>
<settlement type="city">Marseille</settlement>
</placeName>
<orgName type="university">Université de Provence</orgName>
</affiliation>
</author>
<author>
<name sortKey="Woo, Tony H S" sort="Woo, Tony H S" uniqKey="Woo T" first="Tony H. S." last="Woo">Tony H. S. Woo</name>
<affiliation wicri:level="1">
<country xml:lang="fr">Australie</country>
<wicri:regionArea>School of Biomolecular and Biomedical Sciences, Faculty of Science, Griffith University, Brisbane, Queensland, 4111</wicri:regionArea>
<wicri:noRegion>4111</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Thomas, Pierre" sort="Thomas, Pierre" uniqKey="Thomas P" first="Pierre" last="Thomas">Pierre Thomas</name>
<affiliation wicri:level="4">
<country xml:lang="fr">France</country>
<wicri:regionArea>Département de Biologie, Université de la Méditerranée, 13288, Marseille Cedex 9</wicri:regionArea>
<placeName>
<region type="region" nuts="2">Provence-Alpes-Côte d'Azur</region>
<settlement type="city">Marseille</settlement>
<settlement type="city">Marseille</settlement>
</placeName>
<orgName type="university">Université de la Méditerranée</orgName>
</affiliation>
</author>
<author>
<name sortKey="Garcia, Jean Louis" sort="Garcia, Jean Louis" uniqKey="Garcia J" first="Jean-Louis" last="Garcia">Jean-Louis Garcia</name>
<affiliation wicri:level="4">
<country xml:lang="fr">France</country>
<wicri:regionArea>Laboratoire ORSTOM de Microbiologie des Anaérobies, Université de Provence, CESB-ESIL case 925, 163 Avenue de Luminy, 13288, Marseille Cedex 9</wicri:regionArea>
<placeName>
<region type="region" nuts="2">Provence-Alpes-Côte d'Azur</region>
<settlement type="city">Marseille</settlement>
<settlement type="city">Marseille</settlement>
</placeName>
<orgName type="university">Université de Provence</orgName>
</affiliation>
</author>
<author>
<name sortKey="Patel, Bharat K C" sort="Patel, Bharat K C" uniqKey="Patel B" first="Bharat K. C." last="Patel">Bharat K. C. Patel</name>
<affiliation wicri:level="1">
<country xml:lang="fr">Australie</country>
<wicri:regionArea>School of Biomolecular and Biomedical Sciences, Faculty of Science, Griffith University, Brisbane, Queensland, 4111</wicri:regionArea>
<wicri:noRegion>4111</wicri:noRegion>
</affiliation>
</author>
</analytic>
<monogr></monogr>
<series>
<title level="j">Anaerobe</title>
<title level="j" type="abbrev">YANAE</title>
<idno type="ISSN">1075-9964</idno>
<imprint>
<publisher>ELSEVIER</publisher>
<date type="published" when="1998">1998</date>
<biblScope unit="volume">4</biblScope>
<biblScope unit="issue">6</biblScope>
<biblScope unit="page" from="283">283</biblScope>
<biblScope unit="page" to="291">291</biblScope>
</imprint>
<idno type="ISSN">1075-9964</idno>
</series>
</biblStruct>
</sourceDesc>
<seriesStmt>
<idno type="ISSN">1075-9964</idno>
</seriesStmt>
</fileDesc>
<profileDesc>
<textClass>
<keywords scheme="KwdEn" xml:lang="en">
<term>Academic press</term>
<term>Accession numbers</term>
<term>Acetobacterium</term>
<term>Acetobacterium carbinolicum</term>
<term>Acetobacterium woodii</term>
<term>Aggregans</term>
<term>Anaerobic</term>
<term>Anaerobic methanogenic digestor</term>
<term>Arch microbiol</term>
<term>Aromatic</term>
<term>Aromatic compounds</term>
<term>Bacteriol</term>
<term>Bacterium</term>
<term>Barkeri</term>
<term>Basal</term>
<term>Basal medium</term>
<term>Betaine</term>
<term>Butyrate acetate</term>
<term>Callanderi</term>
<term>Carbon compounds</term>
<term>Cell wall surface</term>
<term>Cellobiose</term>
<term>Clostridium</term>
<term>Clostridium formicoaceticum</term>
<term>Column temperature</term>
<term>Crotonate</term>
<term>Database</term>
<term>Digestor</term>
<term>Electron acceptors</term>
<term>Elemental sulfur</term>
<term>Energy source</term>
<term>Eubacterium</term>
<term>Eubacterium aggregans</term>
<term>Eubacterium aggregans, aromatic compounds, homoacetogen, methoxyl group,o-demethylation</term>
<term>Eubacterium barkeri</term>
<term>Eubacterium callanderi</term>
<term>Eubacterium limosum</term>
<term>Extracellular glucocalix matrix</term>
<term>Fatty acids</term>
<term>Fems microbiol lett</term>
<term>Flow rate</term>
<term>Formate</term>
<term>Fructose</term>
<term>Galactose</term>
<term>Genbank database</term>
<term>Genus clostridium</term>
<term>Glucose</term>
<term>High performance</term>
<term>Holofaga foetida</term>
<term>Homoacetogenic bacterium</term>
<term>Human feces</term>
<term>Hungate</term>
<term>Hungate tubes</term>
<term>Hydroxyl group</term>
<term>Initial denaturation</term>
<term>Injection loop</term>
<term>Lactate</term>
<term>Lactose</term>
<term>Limosum</term>
<term>Mannitol</term>
<term>Marseille cedex</term>
<term>Methanol</term>
<term>Methoxyl</term>
<term>Methoxyl group</term>
<term>Methoxyl groups</term>
<term>Methoxylated</term>
<term>Microbiol</term>
<term>Moorella thermoacetica</term>
<term>Nacl</term>
<term>Nacl concentration ranges</term>
<term>Nucleic acids</term>
<term>Numerous projections</term>
<term>Olive mill wastewater</term>
<term>Optimum growth temperature</term>
<term>Other sequences</term>
<term>Phylogenetic analysis</term>
<term>Pure cultures</term>
<term>Reference culture</term>
<term>Renaturation rates</term>
<term>Ribosomal database project</term>
<term>Rrna gene sequence</term>
<term>Similarity value</term>
<term>Sole carbon</term>
<term>Sporomusa termitida</term>
<term>Sucrose</term>
<term>Syringic acid</term>
<term>Syst</term>
<term>Syst appl microbiol</term>
<term>Syst bacteriol</term>
<term>Temperature range</term>
<term>Transmission electron micrograph</term>
<term>Type strain</term>
</keywords>
<keywords scheme="Teeft" xml:lang="en">
<term>Academic press</term>
<term>Accession numbers</term>
<term>Acetobacterium</term>
<term>Acetobacterium carbinolicum</term>
<term>Acetobacterium woodii</term>
<term>Aggregans</term>
<term>Anaerobic</term>
<term>Anaerobic methanogenic digestor</term>
<term>Arch microbiol</term>
<term>Aromatic</term>
<term>Aromatic compounds</term>
<term>Bacteriol</term>
<term>Bacterium</term>
<term>Barkeri</term>
<term>Basal</term>
<term>Basal medium</term>
<term>Betaine</term>
<term>Butyrate acetate</term>
<term>Callanderi</term>
<term>Carbon compounds</term>
<term>Cell wall surface</term>
<term>Cellobiose</term>
<term>Clostridium</term>
<term>Clostridium formicoaceticum</term>
<term>Column temperature</term>
<term>Crotonate</term>
<term>Database</term>
<term>Digestor</term>
<term>Electron acceptors</term>
<term>Elemental sulfur</term>
<term>Energy source</term>
<term>Eubacterium</term>
<term>Eubacterium aggregans</term>
<term>Eubacterium barkeri</term>
<term>Eubacterium callanderi</term>
<term>Eubacterium limosum</term>
<term>Extracellular glucocalix matrix</term>
<term>Fatty acids</term>
<term>Fems microbiol lett</term>
<term>Flow rate</term>
<term>Formate</term>
<term>Fructose</term>
<term>Galactose</term>
<term>Genbank database</term>
<term>Genus clostridium</term>
<term>Glucose</term>
<term>High performance</term>
<term>Holofaga foetida</term>
<term>Homoacetogenic bacterium</term>
<term>Human feces</term>
<term>Hungate</term>
<term>Hungate tubes</term>
<term>Hydroxyl group</term>
<term>Initial denaturation</term>
<term>Injection loop</term>
<term>Lactate</term>
<term>Lactose</term>
<term>Limosum</term>
<term>Mannitol</term>
<term>Marseille cedex</term>
<term>Methanol</term>
<term>Methoxyl</term>
<term>Methoxyl group</term>
<term>Methoxyl groups</term>
<term>Methoxylated</term>
<term>Microbiol</term>
<term>Moorella thermoacetica</term>
<term>Nacl</term>
<term>Nacl concentration ranges</term>
<term>Nucleic acids</term>
<term>Numerous projections</term>
<term>Olive mill wastewater</term>
<term>Optimum growth temperature</term>
<term>Other sequences</term>
<term>Phylogenetic analysis</term>
<term>Pure cultures</term>
<term>Reference culture</term>
<term>Renaturation rates</term>
<term>Ribosomal database project</term>
<term>Rrna gene sequence</term>
<term>Similarity value</term>
<term>Sole carbon</term>
<term>Sporomusa termitida</term>
<term>Sucrose</term>
<term>Syringic acid</term>
<term>Syst</term>
<term>Syst appl microbiol</term>
<term>Syst bacteriol</term>
<term>Temperature range</term>
<term>Transmission electron micrograph</term>
<term>Type strain</term>
</keywords>
<keywords scheme="Wicri" type="topic" xml:lang="fr">
<term>Base de données</term>
<term>Glucose</term>
<term>Lactose</term>
<term>Méthanol</term>
<term>Saccharose</term>
</keywords>
</textClass>
<langUsage>
<language ident="en">en</language>
</langUsage>
</profileDesc>
</teiHeader>
<front>
<div type="abstract" xml:lang="en">Abstract: A strictly anaerobic, homoacetogenic, Gram-positive, non spore-forming bacterium, designated strain SR12T(T=type strain), was isolated from an anaerobic methanogenic digestor fed with olive mill wastewater. Yeast extract was required for growth but could also be used as sole carbon and energy source. Strain SR12Tutilized a few carbohydrates (glucose, fructose and sucrose), organic compounds (lactate, crotonate, formate and betaine), alcohols (methanol), the methoxyl group of some methoxylated aromatic compounds, and H2+CO2. The end-products of carbohydrate fermentation were acetate, formate, butyrate, H2and CO2. End-products from lactate and methoxylated aromatic compounds were acetate and butyrate. Strain SR12Twas non-motile, formed aggregates, had a G+C content of 55 mol % and grew optimally at 35°C and pH 7.2 on a medium containing glucose. Phylogenetically, strain SR12Twas related toEubacterium barkeri, E. callanderi, andE. limosumwithE. barkerias the closest relative (similarity of 98%) with which it bears little phenotypic similarity or DNA homology (60%). On the basis of its phenotypic, genotypic, and phylogenetic characteristics, we propose to designate strain SR12TasEubacterium aggreganssp. nov. The type strain is SR12T(=DSM 12183).</div>
</front>
</TEI>
<affiliations>
<list>
<country>
<li>Australie</li>
<li>France</li>
</country>
<region>
<li>Provence-Alpes-Côte d'Azur</li>
</region>
<settlement>
<li>Marseille</li>
</settlement>
<orgName>
<li>Université de Provence</li>
<li>Université de la Méditerranée</li>
</orgName>
</list>
<tree>
<country name="France">
<region name="Provence-Alpes-Côte d'Azur">
<name sortKey="Mechichi, Tahar" sort="Mechichi, Tahar" uniqKey="Mechichi T" first="Tahar" last="Mechichi">Tahar Mechichi</name>
</region>
<name sortKey="Garcia, Jean Louis" sort="Garcia, Jean Louis" uniqKey="Garcia J" first="Jean-Louis" last="Garcia">Jean-Louis Garcia</name>
<name sortKey="Labat, Marc" sort="Labat, Marc" uniqKey="Labat M" first="Marc" last="Labat">Marc Labat</name>
<name sortKey="Thomas, Pierre" sort="Thomas, Pierre" uniqKey="Thomas P" first="Pierre" last="Thomas">Pierre Thomas</name>
</country>
<country name="Australie">
<noRegion>
<name sortKey="Woo, Tony H S" sort="Woo, Tony H S" uniqKey="Woo T" first="Tony H. S." last="Woo">Tony H. S. Woo</name>
</noRegion>
<name sortKey="Patel, Bharat K C" sort="Patel, Bharat K C" uniqKey="Patel B" first="Bharat K. C." last="Patel">Bharat K. C. Patel</name>
</country>
</tree>
</affiliations>
</record>

Pour manipuler ce document sous Unix (Dilib)

EXPLOR_STEP=$WICRI_ROOT/Wicri/Asie/explor/AustralieFrV1/Data/Main/Exploration
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 00C998 | SxmlIndent | more

Ou

HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 00C998 | SxmlIndent | more

Pour mettre un lien sur cette page dans le réseau Wicri

{{Explor lien
   |wiki=    Wicri/Asie
   |area=    AustralieFrV1
   |flux=    Main
   |étape=   Exploration
   |type=    RBID
   |clé=     ISTEX:264023BBB45CA521C0560E4C3A9ECB01DEAD1F1D
   |texte=   Eubacterium aggregans sp. nov., a New Homoacetogenic Bacterium from Olive Mill Wastewater Treatment Digestor
}}

Wicri

This area was generated with Dilib version V0.6.33.
Data generation: Tue Dec 5 10:43:12 2017. Site generation: Tue Mar 5 14:07:20 2024